Enum: CdsPhaseType
For features of type CDS (coding sequence), the phase indicates where the feature begins with reference to the reading frame. The phase is one of the integers 0, 1, or 2, indicating the number of bases that should be removed from the beginning of this feature to reach the first base of the next codon.
URI: CdsPhaseType
Permissible Values
| Value | Meaning | Description |
|---|---|---|
| 0 | None | Zero bases from reading frame to feature start |
| 1 | None | One base from reading frame to feature start |
| 2 | None | Two bases from reading frame to feature start |
Slots
| Name | Description |
|---|---|
| cds_phase | For features of type CDS, the phase indicates where the next codon begins rel... |
Identifier and Mapping Information
Schema Source
- from schema: https://github.com/kbase/cdm-schema
LinkML Source
name: CdsPhaseType
description: For features of type CDS (coding sequence), the phase indicates where
the feature begins with reference to the reading frame. The phase is one of the
integers 0, 1, or 2, indicating the number of bases that should be removed from
the beginning of this feature to reach the first base of the next codon.
from_schema: https://github.com/kbase/cdm-schema
rank: 1000
permissible_values:
'0':
text: '0'
description: Zero bases from reading frame to feature start.
'1':
text: '1'
description: One base from reading frame to feature start.
'2':
text: '2'
description: Two bases from reading frame to feature start.