Class: ClusterMember

Relationship representing membership of a cluster. An optional score can be assigned to each cluster member.

classDiagram class ClusterMember click ClusterMember href "../ClusterMember" Table <|-- ClusterMember click Table href "../Table" ClusterMember : cluster_id ClusterMember : entity_id ClusterMember : is_representative ClusterMember : is_seed ClusterMember : score

Inheritance

Table
- ClusterMember

Slots

Name	Cardinality and Range	Description	Inheritance
cluster_id	1 UUID	Internal (CDM) unique identifier for a cluster	direct
entity_id	1 UUID	Internal (CDM) unique identifier for an entity	direct
is_representative	0..1 Boolean	Whether or not this member is the representative for the cluster	direct
is_seed	0..1 Boolean	Whether or not this is the seed for this cluster	direct
score	0..1 Float	Output from the clustering protocol indicating how closely a member matches t...	direct

Identifier and Mapping Information

Schema Source

from schema: http://kbase.github.io/cdm-schema/cdm_schema

Mappings

Mapping Type	Mapped Value
self	kb_cdm:ClusterMember
native	kb_cdm:ClusterMember

LinkML Source

Direct

name: ClusterMember
description: Relationship representing membership of a cluster. An optional score
  can be assigned to each cluster member.
from_schema: http://kbase.github.io/cdm-schema/cdm_schema
is_a: Table
slots:
- cluster_id
- entity_id
attributes:
  is_representative:
    name: is_representative
    description: Whether or not this member is the representative for the cluster.
      If 'is_representative' is false, it is assumed that this is a cluster member.
    from_schema: http://kbase.github.io/cdm-schema/cdm_components
    rank: 1000
    ifabsent: 'false'
    domain_of:
    - ClusterMember
    range: boolean
  is_seed:
    name: is_seed
    description: Whether or not this is the seed for this cluster.
    from_schema: http://kbase.github.io/cdm-schema/cdm_components
    rank: 1000
    ifabsent: 'false'
    domain_of:
    - ClusterMember
    range: boolean
  score:
    name: score
    description: Output from the clustering protocol indicating how closely a member
      matches the representative.
    from_schema: http://kbase.github.io/cdm-schema/cdm_components
    rank: 1000
    domain_of:
    - ClusterMember
    range: float

Induced

name: ClusterMember
description: Relationship representing membership of a cluster. An optional score
  can be assigned to each cluster member.
from_schema: http://kbase.github.io/cdm-schema/cdm_schema
is_a: Table
attributes:
  is_representative:
    name: is_representative
    description: Whether or not this member is the representative for the cluster.
      If 'is_representative' is false, it is assumed that this is a cluster member.
    from_schema: http://kbase.github.io/cdm-schema/cdm_components
    rank: 1000
    ifabsent: 'false'
    alias: is_representative
    owner: ClusterMember
    domain_of:
    - ClusterMember
    range: boolean
  is_seed:
    name: is_seed
    description: Whether or not this is the seed for this cluster.
    from_schema: http://kbase.github.io/cdm-schema/cdm_components
    rank: 1000
    ifabsent: 'false'
    alias: is_seed
    owner: ClusterMember
    domain_of:
    - ClusterMember
    range: boolean
  score:
    name: score
    description: Output from the clustering protocol indicating how closely a member
      matches the representative.
    from_schema: http://kbase.github.io/cdm-schema/cdm_components
    rank: 1000
    alias: score
    owner: ClusterMember
    domain_of:
    - ClusterMember
    range: float
  cluster_id:
    name: cluster_id
    description: Internal (CDM) unique identifier for a cluster.
    from_schema: http://kbase.github.io/cdm-schema/cdm_schema
    rank: 1000
    alias: cluster_id
    owner: ClusterMember
    domain_of:
    - Cluster
    - ClusterMember
    range: UUID
    required: true
  entity_id:
    name: entity_id
    description: Internal (CDM) unique identifier for an entity.
    from_schema: http://kbase.github.io/cdm-schema/cdm_schema
    rank: 1000
    alias: entity_id
    owner: ClusterMember
    domain_of:
    - Association_X_SupportingObject
    - Entity_X_Measurement
    - ClusterMember
    - Sequence
    - Entity
    - Identifier
    - Name
    - AttributeValue
    range: UUID
    required: true