Class: ContigCollectionXProtein

Captures the relationship between a contig collection and a protein; equivalent to protein is ribosomal translation of (http://purl.obolibrary.org/obo/RO_0002512) contig collection.

URI: kb_cdm:ContigCollectionXProtein

classDiagram class ContigCollectionXProtein click ContigCollectionXProtein href "../ContigCollectionXProtein" Table <|-- ContigCollectionXProtein click Table href "../Table" ContigCollectionXProtein : contig_collection_id ContigCollectionXProtein : protein_id

Inheritance

Table
- ContigCollectionXProtein

Slots

Name	Cardinality and Range	Description	Inheritance
contig_collection_id	1 UUID	Internal (CDM) unique identifier for a contig collection	direct
protein_id	1..* UUID	Internal (CDM) unique identifier for a protein	direct

Identifier and Mapping Information

Schema Source

from schema: http://kbase.github.io/cdm-schema/cdm_schema

Mappings

Mapping Type	Mapped Value
self	kb_cdm:ContigCollectionXProtein
native	kb_cdm:ContigCollectionXProtein

LinkML Source

Direct

name: ContigCollection_X_Protein
description: Captures the relationship between a contig collection and a protein;
  equivalent to protein is ribosomal translation of (http://purl.obolibrary.org/obo/RO_0002512)
  contig collection.
from_schema: http://kbase.github.io/cdm-schema/cdm_schema
is_a: Table
slots:
- contig_collection_id
- protein_id
slot_usage:
  protein_id:
    name: protein_id
    multivalued: true
represents_relationship: true

Induced

name: ContigCollection_X_Protein
description: Captures the relationship between a contig collection and a protein;
  equivalent to protein is ribosomal translation of (http://purl.obolibrary.org/obo/RO_0002512)
  contig collection.
from_schema: http://kbase.github.io/cdm-schema/cdm_schema
is_a: Table
slot_usage:
  protein_id:
    name: protein_id
    multivalued: true
attributes:
  contig_collection_id:
    name: contig_collection_id
    description: Internal (CDM) unique identifier for a contig collection.
    from_schema: http://kbase.github.io/cdm-schema/cdm_schema
    rank: 1000
    alias: contig_collection_id
    owner: ContigCollection_X_Protein
    domain_of:
    - Contig_X_ContigCollection
    - ContigCollection_X_EncodedFeature
    - ContigCollection_X_Feature
    - ContigCollection_X_Protein
    - ContigCollection
    range: UUID
    required: true
  protein_id:
    name: protein_id
    description: Internal (CDM) unique identifier for a protein.
    from_schema: http://kbase.github.io/cdm-schema/cdm_schema
    rank: 1000
    alias: protein_id
    owner: ContigCollection_X_Protein
    domain_of:
    - Contig_X_Protein
    - ContigCollection_X_Protein
    - Feature_X_Protein
    - Protein
    range: UUID
    required: true
    multivalued: true
represents_relationship: true