Class: ContigCollectionXProtein
Captures the relationship between a contig collection and a protein; equivalent to protein is ribosomal translation of (http://purl.obolibrary.org/obo/RO_0002512) contig collection.
URI: kb_cdm:ContigCollectionXProtein
classDiagram
class ContigCollectionXProtein
click ContigCollectionXProtein href "../ContigCollectionXProtein"
Table <|-- ContigCollectionXProtein
click Table href "../Table"
ContigCollectionXProtein : contig_collection_id
ContigCollectionXProtein : protein_id
Inheritance
- Table
- ContigCollectionXProtein
Slots
Name | Cardinality and Range | Description | Inheritance |
---|---|---|---|
contig_collection_id | 1 UUID |
Internal (CDM) unique identifier for a contig collection | direct |
protein_id | 1..* UUID |
Internal (CDM) unique identifier for a protein | direct |
Identifier and Mapping Information
Schema Source
- from schema: http://kbase.github.io/cdm-schema/cdm_schema
Mappings
Mapping Type | Mapped Value |
---|---|
self | kb_cdm:ContigCollectionXProtein |
native | kb_cdm:ContigCollectionXProtein |
LinkML Source
Direct
name: ContigCollection_X_Protein
description: Captures the relationship between a contig collection and a protein;
equivalent to protein is ribosomal translation of (http://purl.obolibrary.org/obo/RO_0002512)
contig collection.
from_schema: http://kbase.github.io/cdm-schema/cdm_schema
is_a: Table
slots:
- contig_collection_id
- protein_id
slot_usage:
protein_id:
name: protein_id
multivalued: true
represents_relationship: true
Induced
name: ContigCollection_X_Protein
description: Captures the relationship between a contig collection and a protein;
equivalent to protein is ribosomal translation of (http://purl.obolibrary.org/obo/RO_0002512)
contig collection.
from_schema: http://kbase.github.io/cdm-schema/cdm_schema
is_a: Table
slot_usage:
protein_id:
name: protein_id
multivalued: true
attributes:
contig_collection_id:
name: contig_collection_id
description: Internal (CDM) unique identifier for a contig collection.
from_schema: http://kbase.github.io/cdm-schema/cdm_schema
rank: 1000
alias: contig_collection_id
owner: ContigCollection_X_Protein
domain_of:
- Contig_X_ContigCollection
- ContigCollection_X_EncodedFeature
- ContigCollection_X_Feature
- ContigCollection_X_Protein
- ContigCollection
range: UUID
required: true
protein_id:
name: protein_id
description: Internal (CDM) unique identifier for a protein.
from_schema: http://kbase.github.io/cdm-schema/cdm_schema
rank: 1000
alias: protein_id
owner: ContigCollection_X_Protein
domain_of:
- Contig_X_Protein
- ContigCollection_X_Protein
- Feature_X_Protein
- Protein
range: UUID
required: true
multivalued: true
represents_relationship: true