Class: ContigCollectionXProtein

Captures the relationship between a contig collection and a protein; equivalent to protein is ribosomal translation of (http://purl.obolibrary.org/obo/RO_0002512) contig collection.

URI: cdm:ContigCollectionXProtein

classDiagram class ContigCollectionXProtein click ContigCollectionXProtein href "../ContigCollectionXProtein" ContigCollectionXProtein : contig_collection_id ContigCollectionXProtein --> "1" ContigCollection : contig_collection_id click ContigCollection href "../ContigCollection" ContigCollectionXProtein : protein_id ContigCollectionXProtein --> "1" Protein : protein_id click Protein href "../Protein"

Slots

Name	Cardinality and Range	Description	Inheritance
contig_collection_id	1 ContigCollection	Internal (CDM) unique identifier for a contig collection	direct
protein_id	1 Protein	Internal (CDM) unique identifier for a protein	direct

Identifier and Mapping Information

Schema Source

from schema: https://github.com/kbase/cdm-schema

Mappings

Mapping Type	Mapped Value
self	cdm:ContigCollectionXProtein
native	cdm:ContigCollectionXProtein

LinkML Source

Direct

name: ContigCollection_X_Protein
description: Captures the relationship between a contig collection and a protein;
  equivalent to protein is ribosomal translation of (http://purl.obolibrary.org/obo/RO_0002512)
  contig collection.
from_schema: https://github.com/kbase/cdm-schema
attributes:
  contig_collection_id:
    name: contig_collection_id
    description: Internal (CDM) unique identifier for a contig collection.
    from_schema: https://github.com/kbase/cdm-schema
    domain_of:
    - Contig_X_ContigCollection
    - ContigCollection_X_Feature
    - ContigCollection_X_Protein
    - ContigCollection
    range: ContigCollection
    required: true
  protein_id:
    name: protein_id
    description: Internal (CDM) unique identifier for a protein.
    from_schema: https://github.com/kbase/cdm-schema
    domain_of:
    - Cluster_X_Protein
    - ContigCollection_X_Protein
    - Feature_X_Protein
    - Protein
    range: Protein
    required: true
represents_relationship: true

Induced

name: ContigCollection_X_Protein
description: Captures the relationship between a contig collection and a protein;
  equivalent to protein is ribosomal translation of (http://purl.obolibrary.org/obo/RO_0002512)
  contig collection.
from_schema: https://github.com/kbase/cdm-schema
attributes:
  contig_collection_id:
    name: contig_collection_id
    description: Internal (CDM) unique identifier for a contig collection.
    from_schema: https://github.com/kbase/cdm-schema
    alias: contig_collection_id
    owner: ContigCollection_X_Protein
    domain_of:
    - Contig_X_ContigCollection
    - ContigCollection_X_Feature
    - ContigCollection_X_Protein
    - ContigCollection
    range: ContigCollection
    required: true
  protein_id:
    name: protein_id
    description: Internal (CDM) unique identifier for a protein.
    from_schema: https://github.com/kbase/cdm-schema
    alias: protein_id
    owner: ContigCollection_X_Protein
    domain_of:
    - Cluster_X_Protein
    - ContigCollection_X_Protein
    - Feature_X_Protein
    - Protein
    range: Protein
    required: true
represents_relationship: true