Class: ContigXEncodedFeature
Captures the relationship between a contig and an encoded feature.
URI: kb_cdm:ContigXEncodedFeature
classDiagram
class ContigXEncodedFeature
click ContigXEncodedFeature href "../ContigXEncodedFeature/"
LinkerTable <|-- ContigXEncodedFeature
click LinkerTable href "../LinkerTable/"
ContigXEncodedFeature : contig_id
ContigXEncodedFeature : encoded_feature_id
Inheritance
- Table
- LinkerTable
- ContigXEncodedFeature
- LinkerTable
Slots
Name | Cardinality and Range | Description | Inheritance |
---|---|---|---|
contig_id | 1 CdmContigId |
Internal (CDM) unique identifier for a contig. From the Entity table: entity_id where entity_type == 'Contig'. |
direct |
encoded_feature_id | 1..* CdmEncodedFeatureId |
Internal (CDM) unique identifier for an encoded feature. From the Entity table: entity_id where entity_type == 'EncodedFeature'. |
direct |
Usages
used by | used in | type | used |
---|---|---|---|
Schema | contig_x_encoded_features | range | ContigXEncodedFeature |
Identifier and Mapping Information
Schema Source
- from schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema
Mappings
Mapping Type | Mapped Value |
---|---|
self | kb_cdm:ContigXEncodedFeature |
native | kb_cdm:ContigXEncodedFeature |
LinkML Source
Direct
name: Contig_x_EncodedFeature
description: Captures the relationship between a contig and an encoded feature.
from_schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema
is_a: LinkerTable
slots:
- contig_id
- encoded_feature_id
slot_usage:
encoded_feature_id:
name: encoded_feature_id
multivalued: true
represents_relationship: true
Induced
name: Contig_x_EncodedFeature
description: Captures the relationship between a contig and an encoded feature.
from_schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema
is_a: LinkerTable
slot_usage:
encoded_feature_id:
name: encoded_feature_id
multivalued: true
attributes:
contig_id:
name: contig_id
description: 'Internal (CDM) unique identifier for a contig.
From the Entity table: entity_id where entity_type == ''Contig''.
'
from_schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema
rank: 1000
alias: contig_id
owner: Contig_x_EncodedFeature
domain_of:
- Contig
- Contig_x_ContigCollection
- Contig_x_EncodedFeature
- Contig_x_Feature
- Contig_x_Protein
range: cdm_contig_id
required: true
encoded_feature_id:
name: encoded_feature_id
description: 'Internal (CDM) unique identifier for an encoded feature.
From the Entity table: entity_id where entity_type == ''EncodedFeature''.
'
from_schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema
rank: 1000
alias: encoded_feature_id
owner: Contig_x_EncodedFeature
domain_of:
- EncodedFeature
- Contig_x_EncodedFeature
- ContigCollection_x_EncodedFeature
- EncodedFeature_x_Feature
- EncodedFeature_x_Protein
range: cdm_encoded_feature_id
required: true
multivalued: true
represents_relationship: true