Class: ContigXProtein

Captures the relationship between a contig and a protein; equivalent to protein is ribosomal translation of (http://purl.obolibrary.org/obo/RO_0002512) contig.

URI: kb_cdm:ContigXProtein

classDiagram class ContigXProtein click ContigXProtein href "../ContigXProtein" Table <|-- ContigXProtein click Table href "../Table" ContigXProtein : contig_id ContigXProtein : protein_id

Inheritance

Table
- ContigXProtein

Slots

Name	Cardinality and Range	Description	Inheritance
contig_id	1 UUID	Internal (CDM) unique identifier for a contig	direct
protein_id	1..* UUID	Internal (CDM) unique identifier for a protein	direct

Identifier and Mapping Information

Schema Source

from schema: http://kbase.github.io/cdm-schema/cdm_schema

Mappings

Mapping Type	Mapped Value
self	kb_cdm:ContigXProtein
native	kb_cdm:ContigXProtein

LinkML Source

Direct

name: Contig_X_Protein
description: Captures the relationship between a contig and a protein; equivalent
  to protein is ribosomal translation of (http://purl.obolibrary.org/obo/RO_0002512)
  contig.
from_schema: http://kbase.github.io/cdm-schema/cdm_schema
is_a: Table
slots:
- contig_id
- protein_id
slot_usage:
  protein_id:
    name: protein_id
    multivalued: true
represents_relationship: true

Induced

name: Contig_X_Protein
description: Captures the relationship between a contig and a protein; equivalent
  to protein is ribosomal translation of (http://purl.obolibrary.org/obo/RO_0002512)
  contig.
from_schema: http://kbase.github.io/cdm-schema/cdm_schema
is_a: Table
slot_usage:
  protein_id:
    name: protein_id
    multivalued: true
attributes:
  contig_id:
    name: contig_id
    description: Internal (CDM) unique identifier for a contig.
    from_schema: http://kbase.github.io/cdm-schema/cdm_schema
    rank: 1000
    alias: contig_id
    owner: Contig_X_Protein
    domain_of:
    - Contig_X_ContigCollection
    - Contig_X_EncodedFeature
    - Contig_X_Feature
    - Contig_X_Protein
    - Contig
    range: UUID
    required: true
  protein_id:
    name: protein_id
    description: Internal (CDM) unique identifier for a protein.
    from_schema: http://kbase.github.io/cdm-schema/cdm_schema
    rank: 1000
    alias: protein_id
    owner: Contig_X_Protein
    domain_of:
    - Contig_X_Protein
    - ContigCollection_X_Protein
    - Feature_X_Protein
    - Protein
    range: UUID
    required: true
    multivalued: true
represents_relationship: true