Skip to content

Class: FeatureXProtein

Captures the relationship between a feature and a protein; equivalent to feature encodes protein.

URI: kb_cdm:FeatureXProtein

classDiagram class FeatureXProtein click FeatureXProtein href "../FeatureXProtein/" LinkerTable <|-- FeatureXProtein click LinkerTable href "../LinkerTable/" FeatureXProtein : feature_id FeatureXProtein : protein_id

Inheritance

Slots

Name Cardinality and Range Description Inheritance
feature_id 1
CdmFeatureId		 Internal (CDM) unique identifier for a feature.
From the Entity table: entity_id where entity_type == 'Feature'.		 direct
protein_id 1..*
CdmProteinId
 Internal (CDM) unique identifier for a protein.
From the Entity table: entity_id where entity_type == 'Protein'.		 direct

Usages

used by used in type used
Schema feature_x_proteins range FeatureXProtein

Identifier and Mapping Information

Schema Source

  • from schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema

Mappings

Mapping Type Mapped Value
self kb_cdm:FeatureXProtein
native kb_cdm:FeatureXProtein

LinkML Source

Direct

name: Feature_x_Protein
description: Captures the relationship between a feature and a protein; equivalent
  to feature encodes protein.
from_schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema
is_a: LinkerTable
slots:
- feature_id
- protein_id
slot_usage:
  protein_id:
    name: protein_id
    multivalued: true
represents_relationship: true

Induced

name: Feature_x_Protein
description: Captures the relationship between a feature and a protein; equivalent
  to feature encodes protein.
from_schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema
is_a: LinkerTable
slot_usage:
  protein_id:
    name: protein_id
    multivalued: true
attributes:
  feature_id:
    name: feature_id
    description: 'Internal (CDM) unique identifier for a feature.

      From the Entity table: entity_id where entity_type == ''Feature''.

      '
    from_schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema
    rank: 1000
    alias: feature_id
    owner: Feature_x_Protein
    domain_of:
    - Feature
    - Contig_x_Feature
    - ContigCollection_x_Feature
    - EncodedFeature_x_Feature
    - Feature_x_Protein
    range: cdm_feature_id
    required: true
  protein_id:
    name: protein_id
    description: 'Internal (CDM) unique identifier for a protein.

      From the Entity table: entity_id where entity_type == ''Protein''.

      '
    from_schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema
    rank: 1000
    alias: protein_id
    owner: Feature_x_Protein
    domain_of:
    - Protein
    - Contig_x_Protein
    - ContigCollection_x_Protein
    - EncodedFeature_x_Protein
    - Feature_x_Protein
    range: cdm_protein_id
    required: true
    multivalued: true
represents_relationship: true