Class: Identifier

An external identifier for an entity. This should be a URI or CURIE.

classDiagram class Identifier click Identifier href "../Identifier" Identifier : description Identifier : entity_id Identifier : identifier Identifier : source

Slots

Name	Cardinality and Range	Description	Inheritance
description	0..1 String	Brief description of the identifier and/or its relationship to the entity	direct
entity_id	1 UUID	Internal (CDM) unique identifier for the entity that has the identifiers	direct
identifier	1 Uriorcurie	Fully-qualifier URL or CURIE used as an identifier for an entity	direct
source	0..1 Uriorcurie	The data source for the identifier	direct

Usages

used by	used in	type	used
NamedThingWithId	identifiers	range	Identifier
UniqueNamedThing	identifiers	range	Identifier
Contig	identifiers	range	Identifier
Contigset	identifiers	range	Identifier
EncodedFeature	identifiers	range	Identifier
EnvironmentalContext	identifiers	range	Identifier
GoldEnvironmentalContext	identifiers	range	Identifier
MixsEnvironmentalContext	identifiers	range	Identifier
Feature	identifiers	range	Identifier
Genome	identifiers	range	Identifier
Project	identifiers	range	Identifier
Protein	identifiers	range	Identifier
Protocol	identifiers	range	Identifier
Sample	identifiers	range	Identifier

Identifier and Mapping Information

Schema Source

from schema: https://github.com/kbase/cdm-schema

Mappings

Mapping Type	Mapped Value
self	kb_cdm:Identifier
native	kb_cdm:Identifier

LinkML Source

Direct

name: Identifier
description: An external identifier for an entity. This should be a URI or CURIE.
from_schema: https://github.com/kbase/cdm-schema
attributes:
  description:
    name: description
    description: Brief description of the identifier and/or its relationship to the
      entity.
    from_schema: https://github.com/kbase/cdm-schema
    domain_of:
    - NamedThing
    - Event
    - Experiment
    - Identifier
    - Name
    - Project
    - Protein
    - Sample
  entity_id:
    name: entity_id
    description: Internal (CDM) unique identifier for the entity that has the identifiers.
    from_schema: https://github.com/kbase/cdm-schema
    rank: 1000
    domain_of:
    - Identifier
    - Name
    range: UUID
    required: true
  identifier:
    name: identifier
    description: Fully-qualifier URL or CURIE used as an identifier for an entity.
    examples:
    - value: UniProt:Q8KCD6
    - value: EC:5.2.3.14
    from_schema: https://github.com/kbase/cdm-schema
    rank: 1000
    slot_uri: schema:identifier
    domain_of:
    - Identifier
    range: uriorcurie
    required: true
  source:
    name: source
    description: The data source for the identifier. Should be a ROR ID.
    examples:
    - value: UniProt
    - value: NCBI
    - value: KE-Pangenomes
    from_schema: https://github.com/kbase/cdm-schema
    rank: 1000
    domain_of:
    - Identifier
    - Name
    range: uriorcurie

Induced

name: Identifier
description: An external identifier for an entity. This should be a URI or CURIE.
from_schema: https://github.com/kbase/cdm-schema
attributes:
  description:
    name: description
    description: Brief description of the identifier and/or its relationship to the
      entity.
    from_schema: https://github.com/kbase/cdm-schema
    alias: description
    owner: Identifier
    domain_of:
    - NamedThing
    - Event
    - Experiment
    - Identifier
    - Name
    - Project
    - Protein
    - Sample
    range: string
  entity_id:
    name: entity_id
    description: Internal (CDM) unique identifier for the entity that has the identifiers.
    from_schema: https://github.com/kbase/cdm-schema
    rank: 1000
    alias: entity_id
    owner: Identifier
    domain_of:
    - Identifier
    - Name
    range: UUID
    required: true
  identifier:
    name: identifier
    description: Fully-qualifier URL or CURIE used as an identifier for an entity.
    examples:
    - value: UniProt:Q8KCD6
    - value: EC:5.2.3.14
    from_schema: https://github.com/kbase/cdm-schema
    rank: 1000
    slot_uri: schema:identifier
    alias: identifier
    owner: Identifier
    domain_of:
    - Identifier
    range: uriorcurie
    required: true
  source:
    name: source
    description: The data source for the identifier. Should be a ROR ID.
    examples:
    - value: UniProt
    - value: NCBI
    - value: KE-Pangenomes
    from_schema: https://github.com/kbase/cdm-schema
    rank: 1000
    alias: source
    owner: Identifier
    domain_of:
    - Identifier
    - Name
    range: uriorcurie