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Class: OrderedProtocolStep

A list of the steps in a protocol; the step_index indicates the order in which they should be executed.

URI: kb_cdm:OrderedProtocolStep

classDiagram class OrderedProtocolStep click OrderedProtocolStep href "../OrderedProtocolStep/" Table <|-- OrderedProtocolStep click Table href "../Table/" OrderedProtocolStep : protocol_id OrderedProtocolStep : protocol_step_id OrderedProtocolStep : step_index

Inheritance

  • Table
    • OrderedProtocolStep

Slots

Name Cardinality and Range Description Inheritance
protocol_id 1
CdmProtocolId		 Internal (CDM) unique identifier for a protocol.
From the Entity table: entity_id where entity_type == 'Protocol'.		 direct
protocol_step_id 1
CdmId
 Internal CDM unique identifier for a step in a protocol. direct
step_index 1
Integer		 The number of the step in an ordered progression. direct

Usages

used by used in type used
Schema ordered_protocol_steps range OrderedProtocolStep

Identifier and Mapping Information

Schema Source

  • from schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema

Mappings

Mapping Type Mapped Value
self kb_cdm:OrderedProtocolStep
native kb_cdm:OrderedProtocolStep

LinkML Source

Direct

name: OrderedProtocolStep
description: A list of the steps in a protocol; the step_index indicates the order
  in which they should be executed.
from_schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema
is_a: Table
slots:
- protocol_id
- protocol_step_id
attributes:
  step_index:
    name: step_index
    description: The number of the step in an ordered progression.
    from_schema: http://kbase.github.io/cdm-schema/linkml/cdm_protocol
    rank: 1000
    domain_of:
    - OrderedProtocolStep
    range: integer
    required: true

Induced

name: OrderedProtocolStep
description: A list of the steps in a protocol; the step_index indicates the order
  in which they should be executed.
from_schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema
is_a: Table
attributes:
  step_index:
    name: step_index
    description: The number of the step in an ordered progression.
    from_schema: http://kbase.github.io/cdm-schema/linkml/cdm_protocol
    rank: 1000
    alias: step_index
    owner: OrderedProtocolStep
    domain_of:
    - OrderedProtocolStep
    range: integer
    required: true
  protocol_id:
    name: protocol_id
    description: 'Internal (CDM) unique identifier for a protocol.

      From the Entity table: entity_id where entity_type == ''Protocol''.

      '
    from_schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema
    rank: 1000
    slot_uri: CDM:protocol_id
    alias: protocol_id
    owner: OrderedProtocolStep
    domain_of:
    - Cluster
    - Experiment
    - OrderedProtocolStep
    - Protocol
    - ProtocolExecution
    - ProtocolVariable
    - Feature
    range: cdm_protocol_id
    required: true
  protocol_step_id:
    name: protocol_step_id
    description: Internal CDM unique identifier for a step in a protocol.
    from_schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema
    rank: 1000
    slot_uri: CDM:protocol_step_id
    alias: protocol_step_id
    owner: OrderedProtocolStep
    domain_of:
    - OrderedProtocolStep
    - ProtocolStep
    range: cdm_id
    required: true