Class: Protocol

Defined method or set of methods.

classDiagram class Protocol click Protocol href "../Protocol" Table <|-- Protocol click Table href "../Table" Protocol : description Protocol : doi Protocol : protocol_id Protocol : url Protocol : version

Inheritance

Table
- Protocol

Slots

Name	Cardinality and Range	Description	Inheritance
protocol_id	1 UUID	Internal (CDM) unique identifier for a protocol	direct
doi	0..1 String	The DOI for a protocol	direct
description	0..1 String	Brief text description of the protocol	direct
version	0..1 String	The version of the protocol that has been used	direct
url	0..1 String	The URL for a protocol	direct

Usages

used by	used in	type	used
Feature	protocol_id	range	Protocol

Identifier and Mapping Information

Schema Source

from schema: http://kbase.github.io/cdm-schema/cdm_schema

Mappings

Mapping Type	Mapped Value
self	kb_cdm:Protocol
native	kb_cdm:Protocol

LinkML Source

Direct

name: Protocol
description: Defined method or set of methods.
from_schema: http://kbase.github.io/cdm-schema/cdm_schema
is_a: Table
slots:
- protocol_id
slot_usage:
  protocol_id:
    name: protocol_id
    identifier: true
attributes:
  doi:
    name: doi
    description: The DOI for a protocol.
    from_schema: http://kbase.github.io/cdm-schema/cdm_components
    rank: 1000
    domain_of:
    - Protocol
  description:
    name: description
    description: Brief text description of the protocol.
    from_schema: http://kbase.github.io/cdm-schema/cdm_components
    domain_of:
    - Cluster
    - Event
    - Experiment
    - Project
    - Protein
    - Protocol
    - Sample
    - Identifier
    - Name
  version:
    name: version
    description: The version of the protocol that has been used.
    from_schema: http://kbase.github.io/cdm-schema/cdm_components
    domain_of:
    - DataSource
    - Protocol
  url:
    name: url
    description: The URL for a protocol.
    from_schema: http://kbase.github.io/cdm-schema/cdm_components
    domain_of:
    - DataSource
    - Protocol

Induced

name: Protocol
description: Defined method or set of methods.
from_schema: http://kbase.github.io/cdm-schema/cdm_schema
is_a: Table
slot_usage:
  protocol_id:
    name: protocol_id
    identifier: true
attributes:
  doi:
    name: doi
    description: The DOI for a protocol.
    from_schema: http://kbase.github.io/cdm-schema/cdm_components
    rank: 1000
    alias: doi
    owner: Protocol
    domain_of:
    - Protocol
    range: string
  description:
    name: description
    description: Brief text description of the protocol.
    from_schema: http://kbase.github.io/cdm-schema/cdm_components
    alias: description
    owner: Protocol
    domain_of:
    - Cluster
    - Event
    - Experiment
    - Project
    - Protein
    - Protocol
    - Sample
    - Identifier
    - Name
    range: string
  version:
    name: version
    description: The version of the protocol that has been used.
    from_schema: http://kbase.github.io/cdm-schema/cdm_components
    alias: version
    owner: Protocol
    domain_of:
    - DataSource
    - Protocol
    range: string
  url:
    name: url
    description: The URL for a protocol.
    from_schema: http://kbase.github.io/cdm-schema/cdm_components
    alias: url
    owner: Protocol
    domain_of:
    - DataSource
    - Protocol
    range: string
  protocol_id:
    name: protocol_id
    description: Internal (CDM) unique identifier for a protocol.
    from_schema: http://kbase.github.io/cdm-schema/cdm_schema
    rank: 1000
    identifier: true
    alias: protocol_id
    owner: Protocol
    domain_of:
    - Protocol_X_ProtocolParticipant
    - Cluster
    - Feature
    - Protocol
    - Measurement
    range: UUID
    required: true