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Class: Sample

A material entity that can be characterised by an experiment.

URI: kb_cdm:Sample

classDiagram class Sample click Sample href "../Sample" Table <|-- Sample click Table href "../Table" Sample : description Sample : sample_id Sample : type

Inheritance

Slots

Name Cardinality and Range Description Inheritance
sample_id 1
UUID
Internal (CDM) unique identifier for a sample direct
description 0..1
String
Brief textual description of the sample direct
type 0..1
String
The type of entity that the sample is direct

Identifier and Mapping Information

Schema Source

  • from schema: http://kbase.github.io/cdm-schema/cdm_schema

Mappings

Mapping Type Mapped Value
self kb_cdm:Sample
native kb_cdm:Sample

LinkML Source

Direct

name: Sample
description: A material entity that can be characterised by an experiment.
from_schema: http://kbase.github.io/cdm-schema/cdm_schema
is_a: Table
slots:
- sample_id
slot_usage:
  sample_id:
    name: sample_id
    identifier: true
attributes:
  description:
    name: description
    description: Brief textual description of the sample.
    from_schema: http://kbase.github.io/cdm-schema/cdm_components
    domain_of:
    - Cluster
    - Event
    - Experiment
    - Project
    - Protein
    - Protocol
    - Sample
    - Identifier
    - Name
  type:
    name: type
    description: The type of entity that the sample is. Vocab TBD.
    from_schema: http://kbase.github.io/cdm-schema/cdm_components
    domain_of:
    - EncodedFeature
    - Feature
    - Sample
    - Sequence

Induced

name: Sample
description: A material entity that can be characterised by an experiment.
from_schema: http://kbase.github.io/cdm-schema/cdm_schema
is_a: Table
slot_usage:
  sample_id:
    name: sample_id
    identifier: true
attributes:
  description:
    name: description
    description: Brief textual description of the sample.
    from_schema: http://kbase.github.io/cdm-schema/cdm_components
    alias: description
    owner: Sample
    domain_of:
    - Cluster
    - Event
    - Experiment
    - Project
    - Protein
    - Protocol
    - Sample
    - Identifier
    - Name
    range: string
  type:
    name: type
    description: The type of entity that the sample is. Vocab TBD.
    from_schema: http://kbase.github.io/cdm-schema/cdm_components
    alias: type
    owner: Sample
    domain_of:
    - EncodedFeature
    - Feature
    - Sample
    - Sequence
    range: string
  sample_id:
    name: sample_id
    description: Internal (CDM) unique identifier for a sample.
    from_schema: http://kbase.github.io/cdm-schema/cdm_schema
    rank: 1000
    identifier: true
    alias: sample_id
    owner: Sample
    domain_of:
    - Experiment_X_Sample
    - Sample
    range: UUID
    required: true