Slot: cds_phase
For features of type CDS, the phase indicates where the next codon begins relative to the 5' end (where the 5' end of the CDS is relative to the strand of the CDS feature) of the current CDS feature. cds_phase is required if the feature type is CDS.
URI: kb_cdm:cds_phase
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| Feature | A feature localized to an interval along a contig | no |
Properties
- Range: CdsPhaseType
Identifier and Mapping Information
Schema Source
- from schema: https://github.com/kbase/cdm-schema
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | kb_cdm:cds_phase |
| native | kb_cdm:cds_phase |
LinkML Source
name: cds_phase
description: For features of type CDS, the phase indicates where the next codon begins
relative to the 5' end (where the 5' end of the CDS is relative to the strand of
the CDS feature) of the current CDS feature. cds_phase is required if the feature
type is CDS.
from_schema: https://github.com/kbase/cdm-schema
rank: 1000
alias: cds_phase
owner: Feature
domain_of:
- Feature
range: CdsPhaseType