Slot: checkm_contamination
Estimate of the contamination of a contig collection (MAG or genome), estimated by CheckM tool. Ensure that percentage values are converted to floats.
URI: kb_cdm:checkm_contamination Alias: checkm_contamination
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| ContigCollection | A set of individual, overlapping contigs that represent the complete sequenced genome of an organism. | no |
Properties
- Range: Float
Identifier and Mapping Information
Schema Source
- from schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | kb_cdm:checkm_contamination |
| native | kb_cdm:checkm_contamination |
LinkML Source
name: checkm_contamination
description: Estimate of the contamination of a contig collection (MAG or genome),
estimated by CheckM tool. Ensure that percentage values are converted to floats.
from_schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema
rank: 1000
alias: checkm_contamination
owner: ContigCollection
domain_of:
- ContigCollection
range: float