Slot: contig_collection_id
Internal (CDM) unique identifier for a contig collection.
From the Entity table: entity_id where entity_type == 'ContigCollection'.
__
URI: kb_cdm:contig_collection_id Alias: contig_collection_id
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| ContigCollectionXProtein | Captures the relationship between a contig collection and a protein; equivalent to protein is ribosomal translation of (http://purl.obolibrary.org/obo/RO_0002512) contig collection. | no |
| ContigCollectionXEncodedFeature | Captures the relationship between a contig collection and an encoded feature. | no |
| ContigCollection | A set of individual, overlapping contigs that represent the complete sequenced genome of an organism. | yes |
| ContigXContigCollection | Captures the relationship between a contig and a contig collection; equivalent to contig part-of contig collection. | no |
| ContigCollectionXFeature | Captures the relationship between a contig collection and a feature; equivalent to feature part-of contig collection. | no |
Properties
-
Range: CdmContigCollectionId
-
Required: True
Identifier and Mapping Information
Schema Source
- from schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | kb_cdm:contig_collection_id |
| native | kb_cdm:contig_collection_id |
LinkML Source
name: contig_collection_id
description: 'Internal (CDM) unique identifier for a contig collection.
From the Entity table: entity_id where entity_type == ''ContigCollection''.
'
from_schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema
rank: 1000
alias: contig_collection_id
domain_of:
- ContigCollection
- Contig_x_ContigCollection
- ContigCollection_x_EncodedFeature
- ContigCollection_x_Feature
- ContigCollection_x_Protein
range: cdm_contig_collection_id
required: true