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Slot: ctg_powsum

Powersum of all contigs is the same as logsum except that it uses the sum of (length*(length^P)) for some power P (default P=0.25)

URI: cdm:ctg_powsum Alias: ctg_powsum

Applicable Classes

Name Description Modifies Slot
ContigCollection A set of individual, overlapping contigs that represent the complete sequence... no
Genome A contig collection with a completeness score of greater than 90% and a conta... no

Properties

Identifier and Mapping Information

Schema Source

  • from schema: https://github.com/kbase/cdm-schema

Mappings

Mapping Type Mapped Value
self cdm:ctg_powsum
native cdm:ctg_powsum

LinkML Source

name: ctg_powsum
description: Powersum of all contigs is the same as logsum except that it uses the
  sum of (length*(length^P)) for some power P (default P=0.25)
from_schema: https://github.com/kbase/cdm-schema
rank: 1000
alias: ctg_powsum
owner: ContigCollection
domain_of:
- ContigCollection
range: float