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Slot: scaf_L90

The L90 statistic is less than or equal to the L50 statistic; it is the length for which the collection of all scaffolds of that length or longer contains at least 90% of the sum of the lengths of all scaffolds.

URI: cdm:scaf_L90 Alias: scaf_L90

Applicable Classes

Name Description Modifies Slot
ContigCollection A set of individual, overlapping contigs that represent the complete sequence... no
Genome A contig collection with a completeness score of greater than 90% and a conta... no

Properties

Identifier and Mapping Information

Schema Source

  • from schema: https://github.com/kbase/cdm-schema

Mappings

Mapping Type Mapped Value
self cdm:scaf_L90
native cdm:scaf_L90

LinkML Source

name: scaf_L90
description: The L90 statistic is less than or equal to the L50 statistic; it is the
  length for which the collection of all scaffolds of that length or longer contains
  at least 90% of the sum of the lengths of all scaffolds.
from_schema: https://github.com/kbase/cdm-schema
rank: 1000
alias: scaf_L90
owner: ContigCollection
domain_of:
- ContigCollection
range: integer