Slot: scaf_L90
The L90 statistic is less than or equal to the L50 statistic; it is the length for which the collection of all scaffolds of that length or longer contains at least 90% of the sum of the lengths of all scaffolds.
URI: kb_cdm:scaf_L90
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| Genome | A contigset with a completeness score of greater than 90% and a contamination... | no |
| Contigset | A set of individual, overlapping contigs that represent the complete sequence... | no |
Properties
- Range: Integer
Identifier and Mapping Information
Schema Source
- from schema: https://github.com/kbase/cdm-schema
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | kb_cdm:scaf_L90 |
| native | kb_cdm:scaf_L90 |
LinkML Source
name: scaf_L90
description: The L90 statistic is less than or equal to the L50 statistic; it is the
length for which the collection of all scaffolds of that length or longer contains
at least 90% of the sum of the lengths of all scaffolds.
from_schema: https://github.com/kbase/cdm-schema
rank: 1000
alias: scaf_L90
owner: Contigset
domain_of:
- Contigset
range: integer