Slot: scaf_powsum
Powersum of all scaffolds is the same as logsum except that it uses the sum of (length*(length^P)) for some power P (default P=0.25).
URI: cdm:scaf_powsum Alias: scaf_powsum
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| ContigCollection | A set of individual, overlapping contigs that represent the complete sequence... | no |
| Genome | A contig collection with a completeness score of greater than 90% and a conta... | no |
Properties
- Range: Float
Identifier and Mapping Information
Schema Source
- from schema: https://github.com/kbase/cdm-schema
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | cdm:scaf_powsum |
| native | cdm:scaf_powsum |
LinkML Source
name: scaf_powsum
description: Powersum of all scaffolds is the same as logsum except that it uses the
sum of (length*(length^P)) for some power P (default P=0.25).
from_schema: https://github.com/kbase/cdm-schema
rank: 1000
alias: scaf_powsum
owner: ContigCollection
domain_of:
- ContigCollection
range: float