Slot: scaffold_l90
The L90 statistic is less than or equal to the L50 statistic; it is the length for which the collection of all scaffolds of that length or longer contains at least 90% of the sum of the lengths of all scaffolds.
URI: kb_cdm:scaffold_l90 Alias: scaffold_l90
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| ContigCollection | A set of individual, overlapping contigs that represent the complete sequenced genome of an organism. | no |
Properties
- Range: Integer
Aliases
- scaf_L90
- scaffold_L90
Identifier and Mapping Information
Schema Source
- from schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | kb_cdm:scaffold_l90 |
| native | kb_cdm:scaffold_l90 |
LinkML Source
name: scaffold_l90
description: The L90 statistic is less than or equal to the L50 statistic; it is the
length for which the collection of all scaffolds of that length or longer contains
at least 90% of the sum of the lengths of all scaffolds.
from_schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema
aliases:
- scaf_L90
- scaffold_L90
rank: 1000
alias: scaffold_l90
owner: ContigCollection
domain_of:
- ContigCollection
range: integer