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Slot: scaffolds_percent_over_50K

The percentage of the total assembly length represented by scaffolds longer than 50,000 base pairs

URI: kb_cdm:scaffolds_percent_over_50K Alias: scaffolds_percent_over_50K

Applicable Classes

Name Description Modifies Slot
ContigCollection A set of individual, overlapping contigs that represent the complete sequenced genome of an organism. no

Properties

Aliases

  • scaf_pct_gt50K
  • scaffold_pct_gt50K

Identifier and Mapping Information

Schema Source

  • from schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema

Mappings

Mapping Type Mapped Value
self kb_cdm:scaffolds_percent_over_50K
native kb_cdm:scaffolds_percent_over_50K

LinkML Source

name: scaffolds_percent_over_50K
description: The percentage of the total assembly length represented by scaffolds
  longer than 50,000 base pairs
from_schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema
aliases:
- scaf_pct_gt50K
- scaffold_pct_gt50K
rank: 1000
alias: scaffolds_percent_over_50K
owner: ContigCollection
domain_of:
- ContigCollection
range: float