Slot: scaffolds_percent_over_50K
The percentage of the total assembly length represented by scaffolds longer than 50,000 base pairs
URI: kb_cdm:scaffolds_percent_over_50K Alias: scaffolds_percent_over_50K
Applicable Classes
| Name | Description | Modifies Slot |
|---|---|---|
| ContigCollection | A set of individual, overlapping contigs that represent the complete sequenced genome of an organism. | no |
Properties
- Range: Float
Aliases
- scaf_pct_gt50K
- scaffold_pct_gt50K
Identifier and Mapping Information
Schema Source
- from schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema
Mappings
| Mapping Type | Mapped Value |
|---|---|
| self | kb_cdm:scaffolds_percent_over_50K |
| native | kb_cdm:scaffolds_percent_over_50K |
LinkML Source
name: scaffolds_percent_over_50K
description: The percentage of the total assembly length represented by scaffolds
longer than 50,000 base pairs
from_schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema
aliases:
- scaf_pct_gt50K
- scaffold_pct_gt50K
rank: 1000
alias: scaffolds_percent_over_50K
owner: ContigCollection
domain_of:
- ContigCollection
range: float