Skip to content

Slot: scaffolds_total_length_over_50k

The total length of scaffolds longer than 50,000 base pairs

URI: kb_cdm:scaffolds_total_length_over_50k Alias: scaffolds_total_length_over_50k

Applicable Classes

Name Description Modifies Slot
ContigCollection A set of individual, overlapping contigs that represent the complete sequenced genome of an organism. no

Properties

Aliases

  • scaf_l_gt50k
  • scaffold_l_gt50k

Identifier and Mapping Information

Schema Source

  • from schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema

Mappings

Mapping Type Mapped Value
self kb_cdm:scaffolds_total_length_over_50k
native kb_cdm:scaffolds_total_length_over_50k

LinkML Source

name: scaffolds_total_length_over_50k
description: The total length of scaffolds longer than 50,000 base pairs
from_schema: http://kbase.github.io/cdm-schema/linkml/cdm_schema
aliases:
- scaf_l_gt50k
- scaffold_l_gt50k
rank: 1000
alias: scaffolds_total_length_over_50k
owner: ContigCollection
domain_of:
- ContigCollection
range: integer