gtdb/gtdb_taxonomy.schema.json¶

{
  "$schema": "https://json-schema.org/draft/2020-12/schema",
  "title": "JSON Schema for ar53_taxonomy.tsv",
  "description": "Inferred JSON Schema with `qsv schema /Users/gwg/code/kbase/cdm-data-loaders/src/cdm_data_loaders/parsers/gtdb/files/ar53_taxonomy.tsv`",
  "type": "object",
  "properties": {
    "ncbi_id": {
      "description": "ncbi_id column from ar53_taxonomy.tsv",
      "minLength": 18,
      "maxLength": 19,
      "type": [
        "string"
      ],
      "pattern": "^(GB_GCA|RS_GCF)_[0-9]+\\.[0-9]+$"
    },
    "gtdb_id": {
      "description": "gtdb_id column from ar53_taxonomy.tsv",
      "minLength": 27,
      "type": [
        "string"
      ],
      "pattern": "^d__.*?;p__.*?;c__.*?;o__.*?;f__.*?;g__.*?;s__.+$"
    }
  },
  "required": [
    "ncbi_id",
    "gtdb_id"
  ]
}