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uniref/uniref.xsd

src/cdm_data_loaders/schemas/uniref/uniref.xsd
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<?xml version="1.0" encoding="UTF-8"?>
<!-- *****************************************************************************
    UniProt Reference Clusters(UniRef) 
        Version:        version 3.1
        Date:           21-Jun-2011

    Copyright (c) 2011 UniProt consortium 
    All rights reserved.
*******************************************************************************-->
<xs:schema xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns="http://uniprot.org/uniref" targetNamespace="http://uniprot.org/uniref" elementFormDefault="qualified">
    <xs:complexType name="propertyType">
        <xs:attribute name="type" type="xs:string" use="required"/>
        <xs:attribute name="value" type="xs:string" use="required"/>
    </xs:complexType>
    <xs:complexType name="dbReferenceType">
        <xs:annotation>
            <xs:documentation>Database cross-references</xs:documentation>
        </xs:annotation>
        <xs:sequence>
            <xs:element name="property" type="propertyType" minOccurs="0" maxOccurs="unbounded"/>
        </xs:sequence>
        <xs:attribute name="type" type="xs:string" use="required">
            <xs:annotation>
                <xs:documentation>The name of the database this cross-reference is referring to.</xs:documentation>
            </xs:annotation>
        </xs:attribute>
        <xs:attribute name="id" type="xs:string" use="required">
            <xs:annotation>
                <xs:documentation>The ID referred to.</xs:documentation>
            </xs:annotation>
        </xs:attribute>
    </xs:complexType>
    <xs:complexType name="memberType">
        <xs:annotation>
            <xs:documentation>UniRef50/90/100 cluster members</xs:documentation>
        </xs:annotation>
        <xs:sequence>
            <xs:element name="dbReference" type="dbReferenceType"/>
            <xs:element name="sequence" minOccurs="0">
                <xs:complexType>
                    <xs:simpleContent>
                        <xs:extension base="xs:string">
                            <xs:attribute name="length" type="xs:int" use="required"/>
                            <xs:attribute name="checksum" type="xs:string" use="required"/>
                        </xs:extension>
                    </xs:simpleContent>
                </xs:complexType>
            </xs:element>
        </xs:sequence>
    </xs:complexType>
    <xs:complexType name="entryType">
        <xs:annotation>
            <xs:documentation>UniRef50/90/100 entry</xs:documentation>
        </xs:annotation>
        <xs:sequence>
            <xs:element name="name" type="xs:string"/>
            <xs:element name="property" type="propertyType" minOccurs="0" maxOccurs="unbounded"/>
            <xs:element name="representativeMember" type="memberType"/>
            <xs:element name="member" type="memberType" minOccurs="0" maxOccurs="unbounded"/>
        </xs:sequence>
        <xs:attribute name="id" type="xs:ID" use="required">
            <xs:annotation>
                <xs:documentation>The entry identifier.</xs:documentation>
            </xs:annotation>
        </xs:attribute>
        <xs:attribute name="updated" type="xs:date" use="required">
            <xs:annotation>
                <xs:documentation>The update date for the entry.</xs:documentation>
            </xs:annotation>
        </xs:attribute>
    </xs:complexType>
    <xs:element name="UniRef100">
        <xs:complexType>
            <xs:sequence>
                <xs:element name="entry" type="entryType" minOccurs="0" maxOccurs="unbounded"/>
            </xs:sequence>
            <xs:attribute name="releaseDate" type="xs:date" use="required"/>
            <xs:attribute name="version" type="xs:string" use="required"/>
        </xs:complexType>
    </xs:element>
    <xs:element name="UniRef90">
        <xs:complexType>
            <xs:sequence>
                <xs:element name="entry" type="entryType" minOccurs="0" maxOccurs="unbounded"/>
            </xs:sequence>
            <xs:attribute name="releaseDate" type="xs:date" use="required"/>
            <xs:attribute name="version" type="xs:string" use="required"/>
        </xs:complexType>
    </xs:element>
    <xs:element name="UniRef50">
        <xs:complexType>
            <xs:sequence>
                <xs:element name="entry" type="entryType" minOccurs="0" maxOccurs="unbounded"/>
            </xs:sequence>
            <xs:attribute name="releaseDate" type="xs:date" use="required"/>
            <xs:attribute name="version" type="xs:string" use="required"/>
        </xs:complexType>
    </xs:element>
    <xs:element name="UniRef">
        <xs:complexType>
            <xs:sequence>
                <xs:element name="entry" type="entryType" minOccurs="0" maxOccurs="unbounded"/>
            </xs:sequence>
            <xs:attribute name="releaseDate" type="xs:date" use="optional"/>
            <xs:attribute name="version" type="xs:string" use="optional"/>
        </xs:complexType>
    </xs:element>
    <xs:complexType name="UniRefType">
        <xs:choice>
            <xs:element ref="UniRef100"/>
            <xs:element ref="UniRef90"/>
            <xs:element ref="UniRef50"/>
            <xs:element ref="UniRef"/>
        </xs:choice>
    </xs:complexType>
</xs:schema>